| Serie | Sp. | Bilanz | Tore | Pu. | Qu. | Trainer | |||||||||||||
| 1. |  Kristiine JK |
sSSsUuSs | 8 | 06 | 02 | 00 | 19 : 09 | 10 | 20 | 52.7 | Stefan Schneider |
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| 2. | Baltika Narva |
SnSsSsSn | 8 | 06 | 00 | 02 | 20 : 11 | 9 | 18 | 55.8 | Trainerposten frei |
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| 3. | Lelle SK |
SnSsSsnN | 8 | 05 | 00 | 03 | 16 : 11 | 5 | 15 | 46.8 | Markus Gumpfer |
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| 4. | Flora Kehtna |
sNnSuSuS | 8 | 04 | 02 | 02 | 11 : 10 | 1 | 14 | 35.6 | Christian Iten |
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| 5. | Puuma FC |
SnSnSnSu | 8 | 04 | 01 | 03 | 13 : 11 | 2 | 13 | 39.2 | Trainerposten frei |
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| 6. | Orbiit Joehvi |
SnSunNsS | 8 | 04 | 01 | 03 | 14 : 13 | 1 | 13 | 40.0 | Alfred Rahne |
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| 7. | SK Jaerve |
UuSsUnNs | 8 | 03 | 03 | 02 | 12 : 13 | -1 | 12 | 34.0 | Kuno Ritschl |
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| 8. | ALKO Kohtla-Jaerve |
NsSnSnSn | 8 | 04 | 00 | 04 | 15 : 17 | -2 | 12 | 44.3 | Thorsten Kessler |
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| 9. | Veteranid Kohlta-Jaerve |
uSnNuSnS | 8 | 03 | 02 | 03 | 15 : 13 | 2 | 11 | 44.6 | Maria Kastari |
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| 10. | FC Lelle |
SsNuNnSu | 8 | 03 | 02 | 03 | 09 : 11 | -2 | 11 | 31.7 | Trainerposten frei |
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| 11. | FC Levadia Tallinn |
nSnNsNUs | 8 | 03 | 01 | 04 | 12 : 12 | 0 | 10 | 37.7 | Daniel Muecke |
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| 12. | FC Stroomi |
nSnUsSnN | 8 | 03 | 01 | 04 | 12 : 13 | -1 | 10 | 37.6 | Thors Mayer |
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| 13. | FC Flora Faenn Tallinn |
NsSuUnUn | 8 | 02 | 03 | 03 | 08 : 12 | -4 | 9 | 26.7 | Robert Lahnstein |
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| 14. | FC Viimsi |
nUnUnSnS | 8 | 02 | 02 | 04 | 13 : 14 | -1 | 8 | 41.6 | Josef Hartmann |
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| 15. | Loo Auto Saha-Loo |
nSnNuSnU | 8 | 02 | 02 | 04 | 09 : 13 | -4 | 8 | 27.8 | Trainerposten frei |
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| 16. | FC Feeling |
uNsSnUnN | 8 | 02 | 02 | 04 | 10 : 15 | -5 | 8 | 35.3 | Frank Schwarzhaupt |
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| 17. | Lootus Poelva |
UnnUnSuU | 8 | 01 | 04 | 03 | 09 : 10 | -1 | 7 | 30.2 | Pavel Lotus |
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| 18. | FK Spartak Tallinn |
nNnNNnSn | 8 | 01 | 00 | 07 | 06 : 15 | -9 | 3 | 22.5 | Nina Kralle |
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